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AlitheaVersion BRB-seq -Cloud-Based Software

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Demultiplexing, alignment and gene counts at the click of a button.

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The easy-to-use cloud-based BRB-seq pipeline greatly facilitates the handling of raw BRB-seq data.

Simply upload your fastq files and press a button, it`s that simple!

The pipeline allows the user to align BRB-seq data to the genome of choice and produces:

  • a report file displaying the main alignment statistics (e.g. mapping rate and number of detected genes).
  • a gene count matrix that can be easily used for offline gene expression analysis.